Changed file shows up without changes after updating annotations

I’m working on a GitHub Action that runs GraphQL Inspector tool to find issues between an updated GraphQL schema and the latest on the PR base branch. The issue is that after I update the check (using Octokit with checks.update()), the file appears to have no changes in the PR diff:

What is even weirder is that only these two files appear as they have no changes, and I’m not even annotating the schema.json file at all, just the schema.graphql file.

This looks to be a bug, anyone have any ideas?

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@kshahani I’m not totally sure what the report is - please could you link to the PR?

Are you saying that the act of annotating a file caused the changes to dissapear?